Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | IM33_14265 | O34557 | - | 2972900 - 2973571 | 24284.7 |
| gtpase rsga | IM33_14270 | A6TRW0 | - | 2973576 - 2974460 | 33253.9 |
| 3-ketoacyl-acp reductase | IM33_14275 | P51831 | - | 2974558 - 2975295 | 26812.2 |
| serine/threonine protein kinase | IM33_14280 | Q8R9T6 | - | 2975402 - 2977438 | 72735.2 |
| serine/threonine protein phosphatase | IM33_14285 | Q71YJ5 | - | 2977455 - 2978207 | 28112.6 |
| ribosomal rna large subunit methyltransferase n | IM33_14290 | Q182S0 | - | 2978227 - 2979258 | 39423.0 |
| 16s rrna methyltransferase | IM33_14295 | P94464 | - | 2979266 - 2980591 | 50548.3 |
| peptidase | IM33_14300 | O05248 | - | 2980653 - 2981354 | 25866.6 |
| hypothetical protein | IM33_14305 | Not Available | - | 2981421 - 2982173 | 28088.2 |
| methionyl-trna formyltransferase | IM33_14310 | Q182S2 | - | 2982183 - 2983112 | 34316.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.