Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deor faimly transcriptional regulator | IM33_14215 | Not Available | - | 2960200 - 2962128 | 73930.6 |
| pts mannose transporter subunit iiab | IM33_14220 | P71012 | + | 2962365 - 2962817 | 17244.7 |
| pts fructose transporter subunit iib | IM33_14225 | P69818 | + | 2962820 - 2963128 | 10793.3 |
| frua | IM33_14230 | Not Available | + | 2963243 - 2964349 | 38224.1 |
| alpha-mannosidase | IM33_14235 | Not Available | + | 2964423 - 2967101 | 102925.0 |
| histidine kinase | IM33_14240 | Q2YSM6 | - | 2967361 - 2969694 | 88675.3 |
| phob family transcriptional regulator | IM33_14245 | Not Available | - | 2969669 - 2970385 | 27336.2 |
| nitroreductase | IM33_14250 | Not Available | - | 2970790 - 2971446 | 24773.1 |
| had family hydrolase | IM33_14255 | Not Available | - | 2971490 - 2972119 | 24132.6 |
| thiamine pyrophosphokinase | IM33_14260 | O34664 | - | 2972250 - 2972891 | 24102.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.