Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | IM33_14060 | Q99TZ9 | - | 2924891 - 2926201 | 50716.5 |
| transcriptional regulator | IM33_14065 | Not Available | - | 2926195 - 2926902 | 27103.7 |
| metallophosphatase | IM33_14070 | A9BJC1 | - | 2927205 - 2929049 | 68536.5 |
| hypothetical protein | IM33_14075 | Not Available | - | 2929260 - 2930144 | 33920.6 |
| ribonuclease z | IM33_14080 | Q182M7 | + | 2930352 - 2931269 | 34301.7 |
| coa-disulfide reductase | IM33_14085 | O58308 | - | 2931401 - 2932735 | 48972.1 |
| sodium:dicarboxylate symporter | IM33_14090 | Q5WDX9 | + | 2933076 - 2934464 | 49667.6 |
| membrane protein | IM33_14095 | Not Available | - | 2934545 - 2935753 | 47084.4 |
| alginate o-acetyltransferase | IM33_14100 | Q887Q6 | - | 2935769 - 2937187 | 55618.0 |
| hypothetical protein | IM33_14105 | Not Available | - | 2937205 - 2938320 | 42885.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.