Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein | IM33_13590 | Not Available | - | 2807545 - 2807781 | 8902.87 |
| rna-binding protein | IM33_13595 | P28368 | - | 2807992 - 2808552 | 21648.8 |
| tspo and mbr | IM33_13600 | Q8KBX2 | - | 2808745 - 2809242 | 19239.5 |
| aspartyl-trna amidotransferase | IM33_13605 | P54464 | - | 2809353 - 2809796 | 16800.5 |
| 30s ribosomal protein s21 | IM33_13610 | Q182D5 | - | 2809826 - 2810005 | 7020.59 |
| hit family hydrolase | IM33_13615 | O66536 | - | 2810168 - 2810518 | 13057.7 |
| 30s ribosomal protein s12 methylthiotransferase | IM33_13620 | P54462 | - | 2810562 - 2811860 | 50044.3 |
| 16s rrna methyltransferase | IM33_13625 | P57488 | - | 2811862 - 2812620 | 28756.7 |
| ribosomal protein l11 methyltransferase | IM33_13630 | A8MG53 | - | 2812639 - 2813586 | 35135.1 |
| sugar abc transporter atp-binding protein | IM33_13635 | Not Available | + | 2813950 - 2815059 | 41770.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.