Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase alpha subunit | IM33_13535 | Q182B9 | - | 2798425 - 2799303 | 33860.2 |
| hypothetical protein | IM33_13540 | Not Available | - | 2799463 - 2800062 | 22204.7 |
| dna recombination protein reco | IM33_13545 | Q182C0 | - | 2800055 - 2800828 | 29564.1 |
| divalent cation transporter | IM33_13555 | Q5SMG8 | - | 2801022 - 2802401 | 51406.6 |
| gtpase era | IM33_13560 | Q182C3 | - | 2802413 - 2803306 | 33775.1 |
| cytidine deaminase | IM33_13565 | P19079 | - | 2803372 - 2803773 | 14597.2 |
| diacylglycerol kinase | IM33_13570 | Q55143 | - | 2803892 - 2804611 | 25914.9 |
| heat-shock protein | IM33_13575 | Q182C6 | - | 2804617 - 2805078 | 18249.2 |
| phosphate starvation protein phoh | IM33_13580 | P46343 | - | 2805135 - 2806250 | 41740.5 |
| stage iv sporulation protein | IM33_13585 | Not Available | - | 2806189 - 2807532 | 51640.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.