Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aminotransferase | IM33_13485 | Not Available | - | 2787214 - 2788422 | 45333.7 |
| phosphate butyryltransferase | IM33_13490 | P58255 | - | 2788452 - 2789345 | 32255.6 |
| butyrate kinase | IM33_13495 | Q890U0 | - | 2789363 - 2790421 | 38523.3 |
| oxidoreductase | IM33_13500 | Not Available | - | 2790582 - 2791121 | 19940.0 |
| 2-oxoglutarate oxidoreductase | IM33_13505 | Not Available | - | 2791134 - 2791853 | 26122.1 |
| 2-ketoisovalerate ferredoxin oxidoreductase | IM33_13510 | Not Available | - | 2791856 - 2792932 | 39565.6 |
| oxidoreductase | IM33_13515 | Not Available | - | 2792961 - 2793158 | 7350.11 |
| iclr family transcriptional regulator | IM33_13520 | P77300 | - | 2793445 - 2794212 | 28953.0 |
| ferredoxin--nitrite reductase | IM33_13525 | Not Available | + | 2794492 - 2796039 | 58129.2 |
| glycyl-trna synthetase subunit beta | IM33_13530 | Q182B8 | - | 2796359 - 2798425 | 78336.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.