Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase | IM33_13380 | Q181Y7 | - | 2759329 - 2759760 | 15785.3 |
| dna topoisomerase | IM33_13385 | Q65N90 | + | 2759873 - 2762101 | 84739.7 |
| marr family transcriptional regulator | IM33_13390 | Not Available | - | 2762211 - 2762696 | 18344.4 |
| membrane protein | IM33_13395 | Not Available | + | 2762948 - 2764171 | 44500.9 |
| multidrug transporter | IM33_13400 | P25197 | + | 2764175 - 2767309 | 112852.0 |
| multidrug transporter | IM33_13405 | Not Available | + | 2767331 - 2768653 | 50386.3 |
| hypothetical protein | IM33_13410 | Not Available | - | 2768882 - 2769127 | 9182.36 |
| pyruvate phosphate dikinase | IM33_13415 | P22983 | - | 2769346 - 2771973 | 96908.0 |
| phosphotransferase | IM33_13420 | Q181Z6 | - | 2772034 - 2772876 | 31728.9 |
| hypothetical protein | IM33_13425 | O34994 | - | 2772883 - 2773521 | 23448.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.