Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix hydrolase | IM33_13210 | Not Available | - | 2727600 - 2728106 | 19486.3 |
| membrane protein | IM33_13215 | Not Available | - | 2728166 - 2728867 | 25469.2 |
| butyrate kinase | IM33_13220 | Q05619 | - | 2729084 - 2730154 | 38767.8 |
| indolepyruvate oxidoreductase subunit beta | IM33_13225 | O58496 | - | 2730207 - 2730782 | 20932.7 |
| indolepyruvate ferredoxin oxidoreductase | IM33_13230 | O58495 | - | 2730784 - 2732571 | 65720.9 |
| aspartate aminotransferase | IM33_13235 | Not Available | - | 2732632 - 2733891 | 47391.5 |
| fis family transcriptional regulator | IM33_13240 | Not Available | - | 2734151 - 2736142 | 75652.2 |
| diguanylate cyclase | IM33_13245 | Q8XAZ4 | - | 2736159 - 2738045 | 74148.0 |
| diguanylate cyclase | IM33_13250 | O34325 | - | 2738072 - 2739913 | 72937.8 |
| hypothetical protein | IM33_13255 | Not Available | - | 2740044 - 2740463 | 16280.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.