Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| permease | IM33_13160 | Not Available | - | 2718270 - 2719355 | 38852.9 |
| hypothetical protein | IM33_13165 | Not Available | - | 2719373 - 2719558 | 7130.66 |
| sulfur reduction protein dsre | IM33_13170 | Not Available | - | 2719720 - 2720052 | 12069.8 |
| nicotinate-nucleotide pyrophosphorylase | IM33_13175 | P30011 | - | 2720317 - 2721153 | 30479.1 |
| l-aspartate oxidase | IM33_13180 | Q8XNE2 | - | 2721134 - 2722435 | 48551.9 |
| quinolinate synthetase | IM33_13185 | Q185P4 | - | 2722448 - 2723362 | 34341.5 |
| carbon starvation protein csta | IM33_13190 | O86233 | + | 2723780 - 2725237 | 52922.6 |
| hypothetical protein | IM33_13195 | Not Available | + | 2725459 - 2725887 | 16695.7 |
| hypothetical protein | IM33_13200 | Not Available | + | 2725947 - 2726255 | 11392.1 |
| membrane protein | IM33_13205 | P96604 | - | 2726401 - 2727423 | 38023.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.