Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase | IM33_13105 | Not Available | - | 2710289 - 2711983 | 67257.8 |
| had family hydrolase | IM33_13110 | Q5XD45 | + | 2712475 - 2713296 | 30755.3 |
| hypothetical protein | IM33_13120 | Not Available | - | 2713874 - 2714359 | 18299.0 |
| abc transporter atp-binding protein | IM33_13125 | Not Available | - | 2714372 - 2715124 | 28685.3 |
| nitrate abc transporter substrate-binding protein | IM33_13130 | Not Available | - | 2715124 - 2715261 | 5236.77 |
| abc transporter permease | IM33_13135 | Q57856 | - | 2715301 - 2715930 | 23088.0 |
| hypothetical protein | IM33_13140 | Not Available | - | 2715891 - 2716454 | 21261.6 |
| hypothetical protein | IM33_13145 | Not Available | - | 2716464 - 2716688 | 8704.62 |
| sulfonate abc transporter substrate-binding protein | IM33_13150 | Not Available | - | 2716693 - 2717784 | 39817.4 |
| hypothetical protein | IM33_13155 | Not Available | - | 2717819 - 2718277 | 17179.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.