Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_13005 | Not Available | - | 2688554 - 2689474 | 34815.2 |
| 4-hydroxybutyrate dehydrogenase | IM33_13010 | P38945 | - | 2689759 - 2690877 | 41934.3 |
| 4-hydroxybutyrate coa-transferase | IM33_13015 | P38942 | - | 2690897 - 2692204 | 48054.9 |
| hypothetical protein | IM33_13020 | Not Available | - | 2692230 - 2692505 | 10371.6 |
| 4-hydroxybutyryl-coa dehydratase | IM33_13025 | P55792 | - | 2692640 - 2694136 | 55063.7 |
| succinate-semialdehyde dehydrogenase | IM33_13030 | P38947 | - | 2694257 - 2695648 | 50712.0 |
| acetyl-coa hydrolase | IM33_13035 | P38946 | - | 2695680 - 2697224 | 56265.8 |
| membrane protein | IM33_13040 | Q8AAG5 | - | 2697251 - 2698654 | 49803.1 |
| lysr family transcriptional regulator | IM33_13045 | P39592 | + | 2699073 - 2699945 | 33653.1 |
| xaa-pro dipeptidase | IM33_13050 | P54518 | - | 2700087 - 2701166 | 40506.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.