Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | IM33_12905 | P56188 | - | 2666347 - 2667012 | 24635.1 |
| ribose 5-phosphate isomerase | IM33_12910 | P39156 | - | 2667044 - 2667490 | 16367.7 |
| transketolase | IM33_12915 | Q58092 | - | 2667664 - 2668584 | 32316.9 |
| transketolase | IM33_12920 | Q58094 | - | 2668587 - 2669399 | 29204.9 |
| sorbitol dehydrogenase | IM33_12925 | Q8KQL2 | - | 2669490 - 2670521 | 37096.8 |
| alcohol dehydrogenase | IM33_12930 | Q06004 | - | 2670521 - 2671573 | 38267.6 |
| pts system galactitol-specific transporter subunit iic | IM33_12935 | P69832 | - | 2671703 - 2672977 | 45786.9 |
| pts galactitol transporter subunit iib | IM33_12940 | P58035 | - | 2673036 - 2673311 | 9634.92 |
| pts fructose transporter subunit iia | IM33_12945 | Not Available | - | 2673371 - 2673829 | 17368.0 |
| hypothetical protein | IM33_12950 | Not Available | + | 2674342 - 2674587 | 9534.19 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.