Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_12735 | Not Available | + | 2630203 - 2631264 | 39188.2 |
| transposase | IM33_12740 | Not Available | - | 2631463 - 2631562 | 3937.92 |
| flagellar protein flis | IM33_12745 | Not Available | - | 2631758 - 2633011 | 49201.2 |
| dna topoisomerase iii | IM33_12750 | Q63GK5 | - | 2633115 - 2635235 | 80645.2 |
| sodium:alanine symporter | IM33_12755 | P44917 | + | 2635940 - 2637307 | 48215.1 |
| aldolase | IM33_12760 | A6UPI8 | - | 2637480 - 2638127 | 24322.5 |
| ribulose 5-phosphate epimerase | IM33_12765 | Q9KBQ4 | - | 2638145 - 2638831 | 25455.5 |
| iditol 2-dehydrogenase | IM33_12770 | Not Available | - | 2638931 - 2639989 | 38394.6 |
| pts galactitol transporter subunit iic | IM33_12775 | P39365 | - | 2640335 - 2641741 | 51172.6 |
| pts fructose transporter subunit iib | IM33_12780 | Not Available | - | 2641773 - 2642075 | 10624.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.