Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | IM33_12685 | C5D6L9 | - | 2617283 - 2618425 | 42918.1 |
| hypothetical protein | IM33_12690 | Not Available | - | 2618537 - 2619580 | 41157.2 |
| membrane protein | IM33_12695 | Not Available | - | 2619950 - 2620507 | 21075.6 |
| oxidoreductase | IM33_12700 | O07622 | - | 2620534 - 2622060 | 57191.7 |
| abc transporter permease | IM33_12705 | Not Available | - | 2622386 - 2623054 | 24472.7 |
| amino acid abc transporter substrate-binding protein | IM33_12710 | Not Available | - | 2623068 - 2623889 | 30709.6 |
| pts fructose transporter subunit iic | IM33_12715 | Not Available | - | 2624347 - 2626266 | 67669.8 |
| 1-phosphofructokinase | IM33_12720 | O31714 | - | 2626303 - 2627220 | 33864.8 |
| antitermination protein blgg | IM33_12725 | Not Available | - | 2627398 - 2629176 | 67748.5 |
| protein tyrosine phosphatase | IM33_12730 | I6WXK4 | - | 2629188 - 2629928 | 28721.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.