Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine 2,3-aminomutase | IM33_12635 | Q185C5 | - | 2603265 - 2604533 | 48982.9 |
| gntr family transcriptional regulator | IM33_12640 | P96663 | - | 2604934 - 2606316 | 51971.0 |
| aspartate racemase | IM33_12645 | A0A0H3JGH6 | + | 2606443 - 2607129 | 25070.5 |
| hypothetical protein | IM33_12650 | Not Available | - | 2607267 - 2608802 | 57494.6 |
| pts sugar transporter subunit iid | IM33_12655 | Not Available | + | 2609078 - 2610127 | 36529.2 |
| hypothetical protein | IM33_12660 | Not Available | - | 2610176 - 2611210 | 40420.7 |
| cupin | IM33_12665 | Q9X113 | - | 2611228 - 2611575 | 12871.4 |
| amino acid transporter | IM33_12670 | P94408 | + | 2611832 - 2613214 | 51300.1 |
| peptidase m24 | IM33_12675 | B0DZL3 | - | 2613391 - 2615184 | 68251.2 |
| amino acid transporter | IM33_12680 | Not Available | - | 2615436 - 2616827 | 50302.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.