Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l10 | IM33_12580 | Q18CE8 | + | 2587593 - 2588099 | 18606.7 |
| 50s ribosomal protein l7/l12 | IM33_12585 | Q18CE7 | + | 2588157 - 2588522 | 12605.2 |
| oxidoreductase | IM33_12590 | G9FRD7 | + | 2588911 - 2589699 | 28151.9 |
| dna-directed rna polymerase subunit beta | IM33_12595 | Q18CF1 | + | 2590161 - 2593877 | 139459.0 |
| dna-directed rna polymerase subunit alpha/beta' | IM33_12600 | Q18CF3 | + | 2593919 - 2597404 | 129708.0 |
| 30s ribosomal protein s12 | IM33_12605 | Q18CF2 | + | 2597693 - 2598115 | 15436.9 |
| 30s ribosomal protein s7 | IM33_12610 | Q18CF5 | + | 2598238 - 2598708 | 17658.7 |
| elongation factor g | IM33_12615 | Q18CF4 | + | 2598757 - 2600823 | 75900.8 |
| membrane protein | IM33_12625 | Not Available | + | 2601572 - 2602666 | 40803.8 |
| hypothetical protein | IM33_12630 | Not Available | + | 2602817 - 2603173 | 13302.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.