Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | IM33_12520 | Not Available | + | 2579034 - 2579921 | 31581.3 |
| dihydrodipicolinate reductase | IM33_12525 | Q8RBI6 | + | 2579988 - 2580737 | 27259.8 |
| 2,3,4,5-tetrahydropyridine-2,6-carboxylate n-succinyltransferase | IM33_12530 | Q17ZX2 | + | 2580919 - 2581635 | 25332.6 |
| membrane protein | IM33_12535 | Not Available | - | 2581872 - 2582861 | 36232.3 |
| dihydrodipicolinate reductase | IM33_12540 | Not Available | + | 2583212 - 2583967 | 27511.0 |
| 50s ribosomal protein l33 | IM33_12555 | Q18CE3 | + | 2585179 - 2585328 | 5959.26 |
| preprotein translocase subunit sece | IM33_12560 | Not Available | + | 2585354 - 2585575 | 8198.3 |
| antitermination protein nusg | IM33_12565 | Q06795 | + | 2585595 - 2586137 | 20124.1 |
| 50s ribosomal protein l11 | IM33_12570 | Q18CE5 | + | 2586176 - 2586601 | 14802.4 |
| 50s ribosomal protein l1 | IM33_12575 | Q18CE9 | + | 2586672 - 2587370 | 24808.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.