Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | IM33_12415 | Not Available | - | 2557906 - 2558157 | 9545.62 |
| arac family transcriptional regulator | IM33_12420 | Not Available | - | 2558354 - 2558506 | 6070.0 |
| cupin | IM33_12425 | Not Available | - | 2559027 - 2559440 | 15114.7 |
| glycine/betaine abc transporter atp-binding protein | IM33_12430 | G2JZ44 | - | 2559556 - 2560317 | 28471.7 |
| glycine/betaine abc transporter substrate-binding protein | IM33_12435 | B5Z7I3 | - | 2560332 - 2561867 | 57197.2 |
| thiamine abc transporter permease | IM33_12440 | Q5HQW9 | - | 2562223 - 2564463 | 82640.1 |
| hypothetical protein | IM33_12445 | Not Available | - | 2564982 - 2565419 | 15667.9 |
| hypothetical protein | IM33_12450 | Not Available | - | 2565486 - 2566193 | 28179.0 |
| rna polymerase subunit sigma-24 | IM33_12455 | Not Available | - | 2566186 - 2566731 | 21379.2 |
| bacteriocin abc transporter atp-binding protein | IM33_12460 | Q58206 | - | 2566968 - 2567612 | 24058.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.