Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-basal body protein flie | IM33_00970 | Q97H50 | + | 165429 - 165746 | 12194.8 |
| flagellar m-ring protein flif | IM33_00975 | O67241 | + | 165771 - 167321 | 56238.8 |
| flagellar motor switch protein flig | IM33_00980 | Q9WY63 | + | 167334 - 168404 | 39411.3 |
| flagellar assembly protein flih | IM33_00985 | Not Available | + | 168397 - 169128 | 27929.0 |
| atp synthase | IM33_00990 | P23445 | + | 169132 - 170451 | 48098.4 |
| flagellar biosynthesis protein flij | IM33_00995 | Not Available | + | 170483 - 170929 | 17799.2 |
| flagellar hook-length control protein | IM33_01000 | Not Available | + | 170958 - 172154 | 45813.3 |
| flagellar hook capping protein flgd | IM33_01005 | Not Available | + | 172172 - 172765 | 21434.1 |
| flagellar basal body rod protein flgc | IM33_01010 | P23446 | + | 172792 - 173775 | 34618.9 |
| endoflagellar protein | IM33_01015 | Not Available | + | 173788 - 173991 | 7776.59 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.