Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | IM33_12090 | Not Available | - | 2485933 - 2486622 | 26808.8 |
| rpir family transcriptional regulator | IM33_12095 | P26833 | - | 2486686 - 2487534 | 31519.1 |
| hypothetical protein | IM33_12100 | P26832 | - | 2487553 - 2488440 | 32156.3 |
| hypothetical protein | IM33_12105 | Not Available | - | 2488498 - 2489301 | 30815.5 |
| yhch/yjgk/yial family protein | IM33_12110 | Not Available | - | 2489462 - 2489914 | 17716.0 |
| sodium:solute symporter | IM33_12115 | Q5E733 | - | 2490043 - 2491545 | 54658.9 |
| n-acetylneuraminate lyase | IM33_12120 | Q0TUP8 | - | 2491578 - 2492459 | 33372.2 |
| n-acetylmannosamine-6-phosphate 2-epimerase | IM33_12125 | Q185B2 | - | 2492529 - 2493200 | 24657.0 |
| hypothetical protein | IM33_12130 | Not Available | - | 2493476 - 2493967 | 19112.7 |
| membrane protein | IM33_12135 | Not Available | - | 2493989 - 2495353 | 51115.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.