Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | IM33_11990 | P39616 | - | 2462327 - 2463691 | 52084.5 |
| flavodoxin | IM33_11995 | Not Available | - | 2464007 - 2464531 | 19937.4 |
| marr family transcriptional regulator | IM33_12000 | Not Available | - | 2464580 - 2465077 | 19028.2 |
| gtp-binding protein | IM33_12005 | Q8RAS5 | - | 2465317 - 2466588 | 48097.9 |
| multidrug abc transporter atp-binding protein | IM33_12010 | Not Available | - | 2467319 - 2469151 | 67996.9 |
| abc transporter | IM33_12015 | Not Available | - | 2469144 - 2471390 | 82872.6 |
| marr family transcriptional regulator | IM33_12020 | Not Available | - | 2471457 - 2471918 | 18475.4 |
| carbonate dehydratase | IM33_12025 | O34872 | - | 2472223 - 2472789 | 20920.5 |
| xre family transcriptional regulator | IM33_12030 | Not Available | + | 2473480 - 2473818 | 12675.8 |
| xre family transcriptional regulator | IM33_12035 | Not Available | + | 2473840 - 2474157 | 12023.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.