Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | IM33_11935 | P80907 | - | 2452050 - 2452589 | 19310.4 |
| 2-oxoglutarate oxidoreductase | IM33_11940 | Not Available | - | 2452592 - 2453332 | 26913.2 |
| 2-ketoisovalerate ferredoxin oxidoreductase | IM33_11945 | P80908 | - | 2453334 - 2454383 | 39391.9 |
| oxidoreductase | IM33_11950 | Not Available | - | 2454400 - 2454618 | 8065.82 |
| histidinol-phosphate aminotransferase | IM33_11955 | Q2RL44 | - | 2454651 - 2455754 | 41555.2 |
| mfs transporter | IM33_11960 | Not Available | - | 2455857 - 2457287 | 52563.9 |
| sodium:solute symporter | IM33_11970 | P16256 | + | 2457949 - 2459313 | 48792.3 |
| tetr family transcriptional regulator | IM33_11975 | Not Available | + | 2459337 - 2459990 | 25392.6 |
| esterase | IM33_11980 | Not Available | - | 2460110 - 2460892 | 30261.9 |
| membrane protein | IM33_11985 | O32095 | - | 2461012 - 2462178 | 43651.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.