Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| maltose phosphorylase | IM33_11885 | O06993 | - | 2437949 - 2440246 | 89974.3 |
| beta-phosphoglucomutase | IM33_11890 | Not Available | - | 2440243 - 2440923 | 25354.2 |
| hypothetical protein | IM33_11895 | Not Available | - | 2441018 - 2441902 | 34488.3 |
| cyclomaltodextrinase | IM33_11900 | P38940 | - | 2442130 - 2444013 | 73762.4 |
| phosphoesterase | IM33_11905 | Q02150 | - | 2444270 - 2445091 | 32103.7 |
| membrane protein | IM33_11910 | Not Available | - | 2445283 - 2445636 | 13402.2 |
| cell surface protein | IM33_11915 | Not Available | - | 2445706 - 2447148 | 51465.1 |
| rok family transcriptional regulator | IM33_11920 | Not Available | + | 2447748 - 2448959 | 44293.1 |
| ferritin | IM33_11925 | Q46106 | + | 2449051 - 2449566 | 19563.1 |
| acetyl-coa synthetase | IM33_11930 | O29057 | - | 2449827 - 2451926 | 77025.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.