Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase | IM33_11835 | P31075 | - | 2421348 - 2423471 | 80229.1 |
| helicase | IM33_11840 | P47264 | + | 2423806 - 2426985 | 123653.0 |
| alpha/beta hydrolase | IM33_11845 | Not Available | - | 2427120 - 2427875 | 28785.2 |
| rna helicase | IM33_11850 | Q814I2 | - | 2428266 - 2429759 | 57018.7 |
| n-acetylmuramoyl-l-alanine amidase | IM33_11855 | Not Available | - | 2430086 - 2430628 | 20339.3 |
| hypothetical protein | IM33_11860 | Not Available | - | 2430932 - 2431879 | 36643.3 |
| hypothetical protein | IM33_11865 | Not Available | - | 2431907 - 2432401 | 19230.0 |
| abc transporter permease | IM33_11870 | Not Available | + | 2432657 - 2433913 | 46219.1 |
| hypothetical protein | IM33_11875 | Not Available | - | 2434486 - 2436789 | 88965.3 |
| glucosaminidase | IM33_11880 | O32083 | - | 2436837 - 2437730 | 34448.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.