Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gcn5 family acetyltransferase | IM33_11685 | Not Available | - | 2390975 - 2391475 | 20217.0 |
| hypothetical protein | IM33_11690 | O57734 | - | 2391527 - 2392726 | 45440.9 |
| lactate dehydrogenase | IM33_11695 | Q81XJ7 | + | 2393187 - 2394155 | 35151.6 |
| transcriptional regulator | IM33_11700 | Not Available | - | 2394399 - 2395529 | 44056.6 |
| methionine sulfoxide reductase | IM33_11705 | Q9KLX6 | - | 2395685 - 2396638 | 36427.7 |
| patatin | IM33_11710 | P30420 | - | 2396763 - 2397668 | 33784.7 |
| hydroxylamine reductase | IM33_11715 | C6C030 | - | 2398049 - 2399641 | 58523.6 |
| 4fe-4s ferredoxin | IM33_11720 | Not Available | - | 2399698 - 2400426 | 26483.0 |
| crp/fnr family transcriptional regulator | IM33_11725 | Not Available | + | 2400612 - 2401295 | 25896.9 |
| amino acid:proton symporter | IM33_11730 | Not Available | - | 2401459 - 2401611 | 5463.76 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.