Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m20 | IM33_11255 | Not Available | - | 2297800 - 2298240 | 16362.0 |
| peptidase m20 | IM33_11260 | Not Available | - | 2298241 - 2298475 | 8737.38 |
| diaminopropionate ammonia-lyase | IM33_11265 | Not Available | - | 2298601 - 2299815 | 44207.2 |
| nad(fad)-dependent dehydrogenase | IM33_11270 | Q58141 | - | 2300400 - 2301071 | 24457.9 |
| xanthine dehydrogenase | IM33_11275 | Q46799 | - | 2301154 - 2303370 | 80818.3 |
| xanthine dehydrogenase | IM33_11280 | Not Available | - | 2303373 - 2303843 | 17191.9 |
| amidohydrolase | IM33_11285 | Not Available | - | 2303905 - 2305299 | 51556.6 |
| xanthine permease | IM33_11290 | Not Available | - | 2305372 - 2306733 | 46812.9 |
| uracil permease | IM33_11295 | Not Available | - | 2307029 - 2308378 | 47231.4 |
| atpase aaa | IM33_11300 | Q46802 | - | 2308708 - 2309748 | 39331.7 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.