Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | IM33_10815 | Not Available | + | 2206379 - 2208709 | 87423.9 |
| abc transporter atp-binding protein | IM33_10820 | Not Available | + | 2208720 - 2209481 | 28304.7 |
| cytochrome d ubiquinol oxidase subunit ii | IM33_10830 | O32166 | - | 2210524 - 2210856 | 12417.9 |
| hypothetical protein | IM33_10835 | Not Available | - | 2211109 - 2211750 | 24585.7 |
| arsr family transcriptional regulator | IM33_10840 | Not Available | - | 2211731 - 2212024 | 11459.9 |
| membrane protein | IM33_10850 | P46490 | - | 2212581 - 2213333 | 27005.4 |
| arac family transcriptional regulator | IM33_10855 | Not Available | - | 2213384 - 2215039 | 64971.3 |
| merr family transcriptional regulator | IM33_10860 | Not Available | - | 2215438 - 2215806 | 14405.5 |
| 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase | IM33_10865 | B7N5L0 | + | 2215955 - 2216749 | 29244.3 |
| flavodoxin | IM33_10870 | P00322 | - | 2216881 - 2217309 | 15614.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.