Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | + | 129977 - 130080 | Not Available |
| phosphoribosylformylglycinamidine synthase | IM33_00815 | Q9HJA4 | + | 131244 - 135050 | 140734.0 |
| spore coat protein | IM33_00820 | O66251 | + | 135255 - 136127 | 33374.9 |
| glucose-1-phosphate thymidylyltransferase | IM33_00825 | P95778 | + | 136236 - 137105 | 32249.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | IM33_00830 | O27818 | + | 137154 - 137711 | 21768.0 |
| spore coat protein | IM33_00835 | P27830 | + | 137749 - 138732 | 37495.5 |
| transglycosylase | IM33_00840 | O31608 | + | 138771 - 139439 | 24839.4 |
| hypothetical protein | IM33_00845 | P37539 | + | 139448 - 139876 | 16497.6 |
| flagellar motor switch protein flin | IM33_00850 | Q51466 | + | 139900 - 140214 | 11762.0 |
| flagellar biosynthesis anti-sigma factor flgm | IM33_00855 | Not Available | + | 140366 - 140641 | 10379.6 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.