Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_10710 | Not Available | - | 2180850 - 2181932 | 42196.9 |
| hypothetical protein | IM33_10715 | Not Available | - | 2182065 - 2183411 | 49906.5 |
| hypothetical protein | IM33_10720 | P94479 | - | 2183480 - 2184760 | 47571.1 |
| rna chaperone hfq | IM33_10725 | Q187T2 | - | 2184887 - 2185147 | 9903.9 |
| trna delta(2)-isopentenylpyrophosphate transferase | IM33_10730 | Q187T5 | - | 2185261 - 2186211 | 37091.0 |
| dna mismatch repair protein mutl | IM33_10735 | A6TR78 | - | 2186234 - 2188201 | 74909.1 |
| dna mismatch repair protein muts | IM33_10740 | Q187T6 | - | 2188212 - 2191055 | 108650.0 |
| abc transporter atp-binding protein | IM33_10745 | Q9K9G7 | - | 2191219 - 2191953 | 27998.3 |
| abc transporter substrate-binding protein | IM33_10750 | Q9K9G5 | - | 2191922 - 2192938 | 37717.5 |
| abc transporter permease | IM33_10755 | Q57306 | - | 2192960 - 2193730 | 28893.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.