Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_10610 | Not Available | + | 2158174 - 2159034 | 30852.9 |
| acetyltransferase | IM33_10615 | P94482 | - | 2159279 - 2159833 | 21427.9 |
| lysr family transcriptional regulator | IM33_10620 | Q55459 | - | 2160023 - 2160910 | 33620.1 |
| f420-0--gamma-glutamyl ligase | IM33_10625 | Not Available | + | 2161029 - 2162228 | 44073.3 |
| abc transporter permease | IM33_10630 | Not Available | - | 2162420 - 2164975 | 97451.9 |
| abc transporter atp-binding protein | IM33_10635 | Not Available | - | 2164972 - 2165658 | 24943.3 |
| histidine kinase | IM33_10640 | P42245 | - | 2165734 - 2166642 | 34790.9 |
| transcriptional regulator | IM33_10645 | P42244 | - | 2166644 - 2167315 | 25650.9 |
| hypothetical protein | IM33_10650 | Not Available | - | 2167458 - 2168102 | 25244.7 |
| 4fe-4s ferredoxin | IM33_10655 | O68252 | + | 2168395 - 2169459 | 40312.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.