Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar hydrolase | IM33_10450 | Not Available | + | 2123923 - 2125491 | 60327.3 |
| marr family transcriptional regulator | IM33_10455 | Not Available | + | 2125725 - 2126246 | 19946.0 |
| peptidase | IM33_10460 | P80092 | + | 2126642 - 2127811 | 42884.4 |
| aminobenzoyl-glutamate transporter | IM33_10465 | P46133 | + | 2127852 - 2129390 | 54666.9 |
| cystathionine beta-lyase | IM33_10470 | Not Available | + | 2129422 - 2130624 | 46383.6 |
| hypothetical protein | IM33_10475 | Q45831 | + | 2131053 - 2132051 | 36983.6 |
| trehalase | IM33_10480 | Q8RBL8 | + | 2132153 - 2134510 | 90889.3 |
| beta-phosphoglucomutase | IM33_10485 | P71447 | + | 2134607 - 2135275 | 25062.2 |
| sugar abc transporter permease | IM33_10490 | P29823 | + | 2135415 - 2136320 | 33648.7 |
| abc transporter permease | IM33_10495 | Not Available | + | 2136340 - 2137164 | 31213.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.