Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| propanediol utilization protein | IM33_10350 | Q187M0 | + | 2106485 - 2106835 | 12408.9 |
| ethanolamine utilization protein eutp | IM33_10355 | Q9XDM6 | + | 2106843 - 2107292 | 16724.2 |
| fis family transcriptional regulator | IM33_10360 | P9WGM2 | + | 2107394 - 2107969 | 21755.9 |
| histidine kinase | IM33_10365 | P9WGL4 | + | 2107962 - 2109371 | 53662.4 |
| ethanolamine ammonia-lyase | IM33_10370 | P76551 | + | 2109555 - 2110988 | 52270.1 |
| ethanolamine ammonia-lyase | IM33_10375 | P0AEJ7 | + | 2111006 - 2112370 | 50061.7 |
| ethanolamine ammonia-lyase | IM33_10380 | Q187M6 | + | 2112383 - 2113264 | 32064.8 |
| ethanolamine utilization protein eutl | IM33_10385 | Q8XLZ0 | + | 2113284 - 2113937 | 22683.9 |
| ethanolamine carboxysome strutural protein | IM33_10390 | P0DUV5 | + | 2113947 - 2114636 | 25380.3 |
| hypothetical protein | IM33_10395 | P0A9Q8 | + | 2114639 - 2116108 | 52593.9 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.