Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein | IM33_10295 | Not Available | + | 2096342 - 2097256 | 34986.5 |
| copper transporter | IM33_10300 | Not Available | + | 2097344 - 2097964 | 24064.2 |
| oxalate:formate antiporter | IM33_10305 | Not Available | + | 2098120 - 2098902 | 30157.2 |
| hypothetical protein | IM33_10310 | Not Available | + | 2099027 - 2099953 | 34649.9 |
| acetyltransferase | IM33_10315 | P96579 | + | 2099967 - 2100473 | 19701.4 |
| rna polymerase sigma 70 | IM33_10320 | Not Available | + | 2100778 - 2101185 | 15840.9 |
| hypothetical protein | IM33_10325 | Not Available | + | 2101261 - 2101602 | 13078.0 |
| sulfonate abc transporter permease | IM33_10330 | Not Available | - | 2101861 - 2102661 | 29670.4 |
| serine recombinase | IM33_10335 | P17867 | - | 2102856 - 2104454 | 60317.4 |
| alcohol dehydrogenase | IM33_10345 | B1VB76 | + | 2105114 - 2106244 | 41251.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.