Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cmp deaminase | IM33_10205 | P32393 | - | 2083176 - 2083613 | 16536.7 |
| hypothetical protein | IM33_10215 | Not Available | + | 2084356 - 2084769 | 15997.7 |
| acetyltransferase | IM33_10220 | Not Available | + | 2085352 - 2085732 | 14448.3 |
| transcriptional regulator | IM33_10225 | Not Available | + | 2085894 - 2086403 | 19235.9 |
| hypothetical protein | IM33_10255 | P62904 | + | 2088025 - 2088363 | 13193.2 |
| hypothetical protein | IM33_10260 | Not Available | + | 2088819 - 2090060 | 45341.9 |
| conjugal transfer protein | IM33_10270 | Not Available | + | 2092832 - 2093146 | 11888.3 |
| conjugal transfer protein | IM33_10275 | Not Available | + | 2093167 - 2093541 | 14039.6 |
| hypothetical protein | IM33_10285 | Not Available | + | 2094765 - 2095259 | 18712.0 |
| peptidase p60 | IM33_10290 | P96645 | + | 2095316 - 2096326 | 37431.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.