Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | IM33_10100 | P75908 | + | 2062882 - 2066307 | 131235.0 |
| hypothetical protein | IM33_10105 | Not Available | + | 2066336 - 2067082 | 28725.6 |
| cupin | IM33_10110 | Not Available | + | 2067949 - 2068296 | 12749.0 |
| hypothetical protein | IM33_10115 | Not Available | + | 2068657 - 2068939 | 10372.8 |
| integrase | IM33_10120 | Not Available | + | 2068940 - 2069478 | 19802.4 |
| serine recombinase | IM33_10130 | Not Available | - | 2070296 - 2071801 | 58784.7 |
| arac family transcriptional regulator | IM33_10135 | P96662 | - | 2072003 - 2072857 | 32636.2 |
| hypothetical protein | IM33_10140 | Not Available | + | 2073117 - 2073398 | 10545.6 |
| rna polymerase sigma factor | IM33_10145 | Not Available | + | 2073727 - 2074260 | 21044.7 |
| membrane protein | IM33_10150 | Not Available | + | 2074257 - 2075018 | 29494.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.