Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alkyl hydroperoxide reductase | IM33_09995 | Q83CY8 | + | 2037287 - 2037754 | 17619.1 |
| hypothetical protein | IM33_10000 | Q187D2 | + | 2037761 - 2038504 | 29168.3 |
| haloacid dehalogenase | IM33_10005 | Q73E41 | + | 2038632 - 2041292 | 96948.6 |
| o-acetylhomoserine aminocarboxypropyltransferase | IM33_10010 | Q9WZY4 | + | 2041556 - 2042821 | 46247.0 |
| homoserine o-succinyltransferase | IM33_10015 | A3DGI7 | + | 2042851 - 2043738 | 34940.8 |
| tetr family transcriptional regulator | IM33_10020 | Not Available | + | 2043911 - 2044543 | 24197.4 |
| marr family transcriptional regulator | IM33_10025 | Not Available | + | 2044837 - 2045280 | 16990.6 |
| cell division protein ftsh | IM33_10030 | Q0TTK8 | + | 2045311 - 2047128 | 66321.2 |
| histidine kinase | IM33_10035 | Not Available | + | 2047317 - 2050019 | 101621.0 |
| xre family transcriptional regulator | IM33_10040 | P9WGN0 | + | 2050054 - 2050752 | 26412.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.