Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine kinase | IM33_09945 | Not Available | + | 2027360 - 2028019 | 25587.8 |
| transcriptional regulator | IM33_09950 | Not Available | + | 2028313 - 2028654 | 13766.4 |
| hypothetical protein | IM33_09955 | Not Available | + | 2028787 - 2029218 | 17343.5 |
| phosphoglycerate mutase | IM33_09960 | Q9SCS3 | + | 2029419 - 2030060 | 24416.2 |
| pyridine nucleotide-disulfide oxidoreductase | IM33_09965 | Not Available | + | 2030084 - 2031337 | 46587.6 |
| cytidylate kinase | IM33_09970 | Q187C4 | + | 2031384 - 2032034 | 24096.9 |
| acyltransferase | IM33_09975 | O07584 | + | 2032083 - 2032679 | 22647.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | IM33_09980 | Q187C6 | + | 2032692 - 2033531 | 31454.1 |
| membrane protein | IM33_09985 | Not Available | + | 2033784 - 2034938 | 42354.1 |
| adenine deaminase | IM33_09990 | B8FPU4 | + | 2035236 - 2036933 | 62628.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.