Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | IM33_09895 | Not Available | + | 2018154 - 2019071 | 34881.9 |
| chemical-damaging agent resistance protein c | IM33_09900 | Not Available | - | 2019210 - 2019791 | 21092.6 |
| stress protein | IM33_09905 | Q45812 | - | 2019832 - 2020398 | 21448.4 |
| membrane protein | IM33_09910 | Not Available | - | 2020812 - 2021672 | 31250.4 |
| beta-lactamase | IM33_09915 | Not Available | + | 2021821 - 2022711 | 33784.1 |
| nadph-dependent fmn reductase | IM33_09920 | Not Available | - | 2022987 - 2023589 | 23040.0 |
| hypothetical protein | IM33_09925 | P37501 | - | 2024050 - 2024529 | 17927.7 |
| multidrug transporter | IM33_09930 | D2BX50 | + | 2024774 - 2024971 | 7308.23 |
| permease | IM33_09935 | A9MH10 | + | 2025005 - 2025976 | 34775.3 |
| beta-lactamase | IM33_09940 | Not Available | + | 2026464 - 2026841 | 14690.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.