Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid abc transporter atpase | IM33_09795 | P27675 | + | 1997067 - 1997738 | 25132.9 |
| hypothetical protein | IM33_09800 | O32175 | + | 1998029 - 1998391 | 13936.8 |
| hypothetical protein | IM33_09805 | Not Available | + | 1998816 - 1999517 | 27565.8 |
| potassium abc transporter atpase | IM33_09810 | P73846 | + | 1999902 - 2000705 | 30400.8 |
| n-6 dna methylase | IM33_09815 | P50840 | + | 2000760 - 2001908 | 44434.3 |
| hypothetical protein | IM33_09820 | Not Available | + | 2002046 - 2003425 | 52801.8 |
| regulator | IM33_09825 | Not Available | + | 2003454 - 2004152 | 26684.3 |
| histidine kinase | IM33_09830 | P35164 | + | 2004155 - 2005588 | 54527.1 |
| trna pseudouridine synthase a | IM33_09835 | Q8XLQ0 | + | 2005610 - 2006347 | 28591.3 |
| argininosuccinate synthase | IM33_09840 | Q186Z6 | + | 2006927 - 2008126 | 44670.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.