Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_09745 | Not Available | + | 1983311 - 1983775 | 17566.7 |
| glyceraldehyde-3-phosphate dehydrogenase | IM33_09750 | P00362 | + | 1984527 - 1985543 | 37383.9 |
| membrane protein | IM33_09755 | Not Available | + | 1985936 - 1987105 | 41413.9 |
| 2-hydroxyglutaryl-coa dehydratase | IM33_09760 | Q93AM0 | + | 1987495 - 1991748 | 158399.0 |
| cysteine methyltransferase | IM33_09765 | Not Available | + | 1991894 - 1992388 | 18893.8 |
| oxidoreductase | IM33_09770 | Not Available | + | 1992504 - 1992881 | 13683.4 |
| sufbd protein | IM33_09775 | Not Available | + | 1993100 - 1993540 | 17070.5 |
| hypothetical protein | IM33_09780 | O31937 | + | 1993802 - 1995109 | 50649.7 |
| amino acid abc transporter substrate-binding protein | IM33_09785 | P30859 | + | 1995584 - 1996387 | 30239.1 |
| amino acid abc transporter permease | IM33_09790 | P54536 | + | 1996425 - 1997036 | 22948.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.