Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_09695 | Not Available | + | 1974169 - 1974630 | 18191.8 |
| radical sam protein | IM33_09700 | Not Available | + | 1974680 - 1975582 | 35083.7 |
| sam-dependent methyltransferase | IM33_09705 | Not Available | + | 1975932 - 1976762 | 32473.2 |
| hypothetical protein | IM33_09710 | P46850 | + | 1977013 - 1978239 | 46522.0 |
| iron-sulfur protein | IM33_09715 | Not Available | + | 1978701 - 1979462 | 28588.2 |
| phenazine biosynthesis protein | IM33_09720 | Q9HY42 | + | 1979526 - 1980308 | 29383.6 |
| hypothetical protein | IM33_09725 | O31647 | + | 1980579 - 1980998 | 16678.2 |
| membrane protein | IM33_09730 | P94519 | - | 1981099 - 1981365 | 10370.3 |
| trna synthetase subunit beta | IM33_09735 | Not Available | + | 1981593 - 1982294 | 26899.4 |
| dna mismatch repair protein mutt | IM33_09740 | O61902 | + | 1982368 - 1982976 | 23071.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.