Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | IM33_09645 | P39384 | + | 1965126 - 1966277 | 43530.4 |
| 2-hydroxyglutaryl-coa dehydratase | IM33_09650 | P39383 | + | 1966302 - 1967057 | 26971.7 |
| cysteine protease | IM33_09655 | Not Available | + | 1967250 - 1969637 | 87181.5 |
| atpase | IM33_09660 | Not Available | - | 1969863 - 1970096 | 8944.52 |
| tetr family transcriptional regulator | IM33_09665 | Not Available | + | 1970386 - 1970976 | 23177.3 |
| atp-binding protein | IM33_09670 | Not Available | + | 1971089 - 1971934 | 31448.1 |
| abc transporter permease | IM33_09675 | Not Available | + | 1971931 - 1972614 | 25581.8 |
| abc transporter permease | IM33_09680 | Not Available | + | 1972611 - 1973327 | 27298.0 |
| dna-binding protein | IM33_09685 | Not Available | + | 1973409 - 1973678 | 10399.4 |
| peptide deformylase | IM33_09690 | Q97G95 | + | 1973659 - 1974114 | 16979.0 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.