Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sodium:proton antiporter | IM33_09540 | P53381 | - | 1943544 - 1944356 | 29373.8 |
| acetyltransferase | IM33_09545 | Not Available | + | 1944776 - 1945927 | 45212.3 |
| cobalamin-binding protein | IM33_09550 | Q24SP8 | + | 1946055 - 1946693 | 23252.6 |
| methyltransferase | IM33_09555 | Not Available | + | 1946694 - 1947716 | 38843.9 |
| hypothetical protein | IM33_09560 | Not Available | + | 1947706 - 1948326 | 23857.0 |
| hydrolase | IM33_09565 | P0A8Y2 | - | 1948450 - 1949136 | 26582.5 |
| dna-binding protein | IM33_09570 | P0A9U6 | - | 1949150 - 1949695 | 20062.1 |
| histidine kinase | IM33_09580 | O31661 | + | 1951261 - 1953255 | 76564.9 |
| chemotaxis protein chey | IM33_09585 | P14375 | + | 1953255 - 1954577 | 50337.0 |
| beta-aspartyl peptidase | IM33_09590 | O86185 | + | 1954859 - 1956145 | 46779.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.