Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter substrate-binding protein | IM33_09490 | Not Available | - | 1933657 - 1933851 | 7813.35 |
| sodium-dependent phosphate transporter | IM33_09495 | P54463 | - | 1934178 - 1935797 | 58937.5 |
| arac family transcriptional regulator | IM33_09500 | Q52620 | - | 1936107 - 1936847 | 28734.6 |
| nitrogenase iron protein | IM33_09505 | Q2FUB7 | + | 1936996 - 1937745 | 27243.0 |
| heme abc transporter substrate-binding protein | IM33_09510 | Q6GHV3 | + | 1937788 - 1938678 | 32749.3 |
| iron abc transporter permease | IM33_09515 | O34832 | + | 1938695 - 1939675 | 34966.4 |
| iron abc transporter atp-binding protein | IM33_09520 | Q81LM1 | + | 1939675 - 1940469 | 30112.3 |
| oxalate:formate antiporter | IM33_09525 | P10996 | + | 1940568 - 1941845 | 48471.1 |
| oxidoreductase | IM33_09530 | Not Available | + | 1941847 - 1943052 | 45709.6 |
| arginyl-trna synthetase | IM33_09535 | Not Available | + | 1943264 - 1943455 | 7870.61 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.