Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | IM33_09335 | C4Z8N0 | - | 1903838 - 1904299 | 16690.3 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | IM33_09340 | A0Q3H7 | - | 1904395 - 1905588 | 44770.0 |
| riboflavin synthase subunit alpha | IM33_09345 | P50854 | - | 1905611 - 1906276 | 24110.0 |
| riboflavin biosynthesis protein ribd | IM33_09350 | P50853 | - | 1906309 - 1907421 | 41157.9 |
| atp-dependent dna helicase recq | IM33_09355 | O34748 | + | 1907861 - 1910344 | 94631.6 |
| thiamine biosynthesis protein thic | IM33_09360 | Q186R0 | + | 1910687 - 1911988 | 48425.6 |
| thiamine biosynthesis protein this | IM33_09365 | Not Available | + | 1912031 - 1912225 | 7307.79 |
| thiamine biosynthesis protein thif | IM33_09370 | P9WMN6 | + | 1912212 - 1913021 | 30130.9 |
| thiazole synthase | IM33_09375 | Q186R1 | + | 1913084 - 1913854 | 27504.6 |
| thiamine biosynthesis protein thih | IM33_09380 | Not Available | + | 1913871 - 1914974 | 42212.5 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.