Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | IM33_09285 | P0A4H7 | + | 1894429 - 1895100 | 26137.8 |
| histidine kinase | IM33_09290 | Q49XM6 | + | 1895090 - 1896322 | 47529.7 |
| thioredoxin | IM33_09295 | P0A4L4 | + | 1896477 - 1896794 | 11687.3 |
| thioredoxin reductase | IM33_09300 | Q5HQW4 | + | 1896811 - 1897689 | 32279.7 |
| arsr family transcriptional regulator | IM33_09305 | Not Available | + | 1897963 - 1898331 | 13904.1 |
| diguanylate cyclase | IM33_09310 | Not Available | + | 1898334 - 1898705 | 12895.4 |
| hypothetical protein | IM33_09315 | Not Available | - | 1898830 - 1899285 | 17533.8 |
| membrane protein | IM33_09320 | P9WPD9 | - | 1899324 - 1900589 | 45358.9 |
| sodium:alanine symporter | IM33_09325 | Q45068 | + | 1901058 - 1902509 | 52198.4 |
| hypothetical protein | IM33_09330 | Not Available | - | 1902717 - 1903145 | 17531.2 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.