Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_09235 | Not Available | - | 1886642 - 1887307 | 23807.7 |
| flavodoxin | IM33_09240 | Not Available | - | 1887767 - 1888243 | 17789.6 |
| fmn-binding protein | IM33_09245 | Not Available | - | 1888246 - 1888659 | 15116.7 |
| tetr family transcriptional regulator | IM33_09250 | Not Available | - | 1888634 - 1889263 | 24095.4 |
| nucleoside hydrolase | IM33_09255 | Q9P6J4 | + | 1889777 - 1890745 | 36160.8 |
| membrane protein | IM33_09260 | Not Available | + | 1890747 - 1891310 | 19763.1 |
| radical sam protein | IM33_09265 | Not Available | + | 1891319 - 1892008 | 26884.1 |
| dna alkylation repair protein | IM33_09270 | Not Available | + | 1892135 - 1892863 | 29623.9 |
| dna-binding protein | IM33_09275 | Not Available | + | 1892877 - 1893551 | 26664.8 |
| hypothetical protein | IM33_09280 | Not Available | + | 1893577 - 1894413 | 31492.4 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.