Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | IM33_09185 | Not Available | + | 1877673 - 1878695 | 38674.5 |
| abc transporter atp-binding protein | IM33_09190 | Not Available | + | 1878709 - 1879596 | 33346.8 |
| abc transporter permease | IM33_09195 | Not Available | + | 1879602 - 1880375 | 29036.8 |
| transcriptional regulator | IM33_09200 | Not Available | + | 1880487 - 1881212 | 27592.4 |
| histidine kinase | IM33_09205 | O34989 | + | 1881216 - 1882619 | 53963.1 |
| conjugal transfer protein trax | IM33_09210 | Not Available | + | 1882630 - 1883472 | 32437.4 |
| nadph-dependent fmn reductase | IM33_09215 | Not Available | - | 1883679 - 1884299 | 22841.5 |
| hxlr family transcriptional regulator | IM33_09220 | Q9Z9W1 | + | 1884579 - 1884911 | 12651.4 |
| pyrrolidone-carboxylate peptidase | IM33_09225 | Q186N3 | - | 1885026 - 1885667 | 23580.6 |
| membrane protein | IM33_09230 | Not Available | - | 1885688 - 1886620 | 33204.8 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.