Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidase m15 | IM33_08970 | Q47746 | + | 1823691 - 1824497 | 31277.7 |
| amino acid racemase | IM33_08975 | Q9KHL7 | + | 1824515 - 1826653 | 80286.9 |
| hypothetical protein | IM33_08980 | Not Available | + | 1826967 - 1827587 | 23122.6 |
| membrane protein | IM33_08985 | Not Available | - | 1827750 - 1828286 | 20697.1 |
| superoxide dismutase | IM33_08990 | P50059 | - | 1828399 - 1829103 | 27209.4 |
| asparagine synthase | IM33_08995 | Not Available | + | 1829276 - 1831159 | 73154.9 |
| serine protease | IM33_09000 | O06291 | - | 1831251 - 1832687 | 54749.8 |
| chemical-damaging agent resistance protein c | IM33_09005 | Not Available | + | 1833016 - 1833594 | 20732.1 |
| chemical-damaging agent resistance protein c | IM33_09010 | Not Available | + | 1833633 - 1834211 | 21491.0 |
| stress protein | IM33_09015 | P81100 | + | 1834293 - 1834922 | 22904.3 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.