Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Peptostreptococcales
Family
Peptostreptococcaceae
Genus
Clostridioides
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Peptostreptococcales |
| Family | Peptostreptococcaceae |
| Genus | Clostridioides |
| Species | Clostridioides difficile |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 1 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Chains - Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Chemoorganotroph |
| Pathogenicity | Human |
Genome Summary
Clostridioides difficile str. RA09_70
Accession NumberJPPA00000000.1
Gene Summary
Adenine Count
1519866 bp
Thymine Count
1506247 bp
Guanine Count
608909 bp
Cytosine Count
597184 bp
Genome Length
4232226 bp
Protein-coding Genes
3643 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | IM33_08920 | Not Available | + | 1811943 - 1812311 | 13974.9 |
| abc transporter | IM33_08925 | P96605 | + | 1812313 - 1813038 | 27211.2 |
| abc transporter permease | IM33_08930 | Not Available | + | 1813032 - 1813796 | 28226.8 |
| permease | IM33_08935 | Not Available | + | 1814018 - 1815268 | 46418.6 |
| mechanosensitive ion channel protein mscs | IM33_08940 | Q55717 | + | 1815456 - 1816340 | 32926.7 |
| hypothetical protein | IM33_08945 | Not Available | + | 1816701 - 1817318 | 23402.4 |
| beta-lactamase | IM33_08950 | Not Available | + | 1817426 - 1819957 | 94346.9 |
| transcriptional regulator | IM33_08955 | Not Available | + | 1820391 - 1821092 | 27215.0 |
| histidine kinase | IM33_08960 | Not Available | + | 1821082 - 1822224 | 44648.5 |
| d-alanine--d-alanine ligase | IM33_08965 | Q06893 | + | 1822594 - 1823694 | 41024.1 |
Pathways
1 pathway
No pathways found
No metabolic pathways have been associated with this bacterium yet.